Abstract: Under the background of national innovation driven strategy, “Emerging Engineering” arise along with the rapid development of innovative information technology. In order to cultivate a group of patriotic and technological professionals, colleges and universities should grasp the evolutionary trend of higher education development of “stay true to the fundamental task of fostering moral education”. It is of great significance to pay attention to the improvement of the comprehensive capability of emerging engineering professionals, while promoting the national technological innovation and development. In the process of teaching, it is sugguested that teachers deeply explore the integration mechanism of emerging engineering courses and moral education, improve the construction of curriculum ideology and politics of majors, and utilize the mode of “Three-whole Education” during teaching. The teaching content of this course has been enriched and the teaching objectives have been efficiently accomplished. This collaborative teaching mode can better serve the national economic construction and social development strategy and achieve the goal of “moral education”.